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NIM nanosystems initiative munich
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Publications supported by NIM

DNA origami-based single-molecule force spectroscopy unravels the molecular basis of RNA Polymerase III pre-initiation complex stability

Authors: K. Kramm, T. Schröder, J. Gouge, A.M. Vera, F.B. Heiss, T. Liedl, C. Engel, A. Vannini, P. Tinnefeld, D. Grohmann

Areas: 4, 5

Magazine: doi: doi.org/10.1101/775528

Membrane sculpting by curved DNA origami scaffolds

Authors: H. Franquelim, A. Khmelinskaia, J.P. Sobczak, H. Dietz, P. Schwille

Areas: 4

Magazine: Nature Communications (2018), vol 9, article #811

doi 10.1038/s41467-018-03198-9

DNA origami scaffold for studying intrinsically disordered proteins of the nuclear pore complex

Authors: P. Ketterer*, A.N. Ananth*, D.S. Laman, A. Mishra, E. Bertosin, M. Ganji, J. van der Torre, P. Onck, H. Dietz, C. Dekker

Areas: 4

Magazine: Nature Communications (2018), vol 9, article #902

doi 10.1038/s41467-018-03313-w

Signalling and differentiation in emulsion-based multi-compartmentalized in vitro gene circuits

Authors: A. Dupin, F. C. Simmel

Areas: 4, 5

Magazine: Nature Chemistry 11, 32–39 (2019)

Enhanced Efficiency of an Enzyme Cascade on DNA-Activated Silica Surfaces

Authors: K. Vogele, J. List, F. C. Simmel, T. Pirzer

Areas: 4, 5

Magazine: Langmuir 34, 14780–14786 (2018)

Towards synthetic cells using peptide-based reaction compartments

Authors: K. Vogele, T. Frank, L. Gasser, M. A. Goetzfried, M. W. Hackl, S. A. Sieber, F. C. Simmel, and Tobias Pirzer

Areas: 4, 5

Magazine: Nature Communications 9, 3862:1–7 (2018)

Filamentation and restoration of normal growth in Escherichia coli using a combined CRISPRi sgRNA/antisense RNA approach

Authors: A. Mückl*, M. Schwarz-Schilling*, K. Fischer, and F. C. Simmel

Areas: 4, 5

Magazine: PLOS ONE 13, e0198058 (2018)

Optimized Assembly of a Multifunctional RNA-Protein Nanostructure in a Cell-Free Gene Expression System

Authors: M. Schwarz-Schilling, A. Dupin, F. Chizzolini, S. Krishnan, S. S. Mansy, and F. C. Simmel

Areas: 4, 5

Magazine: Nano Letters 18, 2650–2657 (2018)

Mitochondrial Alkbh1 localises to mtRNA granules and its knockdown induces mitochondrial UPR in humans and C. elegans

Authors: Wagner A, Hofmeister O, Rolland SG, Maiser A, Aasumets K, Schmitt S, Schorpp K, Feuchtinger A, Hadian K, Schneider S, Zischka H, Leonhardt H, Conradt B, Gerhold JM and Wolf A

Areas: 4, 5

Magazine: J. Cell Sci., 2019 Aug 21. [Epub ahead of print]

Interference Disturbance Analysis Enables Single-Cell Level Growth and Mobility Characterization for Rapid Antibicrobial Susceptivility Testing

Authors: D. Volbers, V.K. Stierle, K.J. Ditzel, J. Aschauer, J.O.Raedler, M. Opitz and P. Paulitschke

Areas: 4, 5

Magazine: Nanoletters 19, 643-651, (2019)

A high-throughput microscopy method for single-cell analysis of event-time correlations in nanoparticle-induced cell death

Authors: A. Murschhauser, P. J. F. Röttgermann, D. Woschée, M. F. Ober, Y. Yan, K. A. Dawson, J. O. Rädler

Areas: 4, 5

Magazine: Communications Biology, (2019), 2, 35

Ultraflexible Nanowire Array for Label- and Distortion-Free Cellular Force Tracking

Authors: P. Paulitschke, F. Keber, A. Lebedev, J. Stephan, H. Lorenz, S. Hasselmann, D. Heinrich, E. M. Weig

Areas: 4, 5

Magazine: Nano Lett., Article ASAP, (2018), 19, 4, 2207-2214

Rapid Analysis of Cell–Nanoparticle Interactions using Single-Cell Raman Trapping Microscopy

Authors: M. Steinke, F. Zunhammer, E. I. Chatzopoulou, H. Teller, K. Schütze, H. Walles, J. O. Rädler, C. Grüttner

Areas: 4, 5

Magazine: Angewandte Chemie International Edition (2018) 57, 18, 4946-4950

Multi-Experiment Nonlinear Mixed Effect Modeling of Single-Cell Translation Kinetics After Transfection

Authors: F. Fröhlich, A. Reiser, L. Fink, D. Woschée, T. Ligon, F. J. Theis, J. O. Rädler, J. Hasenauer

Areas: 4, 5

Magazine: Npj Systems Biology and Applications (2018), 5 (1)

A Single-Cell Micro-Trench Platform for Automatic Monitoring of Cell Division and Apoptosis After Chemotherapeutic Drug Administration

Authors: E. I. Chatzopoulou, P. Raharja-Liu, A. Murschhauser, F. Sekhavati, F. Buggenthin, A. M. Vollmar, C. Marr, J. O. Rädler

Areas: 4, 5

Magazine: Scientific Reportsvolume (2018), 8 (18042)

Single Cell Microarrays Fabricated by Microscale Plasma-Initiated Protein Patterning (μPIPP) In: Ertl P., Rothbauer M. (eds) Cell-Based Microarrays

Authors: A. Reiser, M. L. Zorn, A. Murschhauser, J. O. Rädler

Areas: 4, 5

Magazine: Methods in Molecular Biology, (2018), 1771, pp. 41-54

Micropatterning as a Tool to Identify Regulatory Triggers and Kinetics of Actin-Mediated Endothelial Mechanosensing

Authors: F. A. Gegenfurtner, B. Jahn, H. Wagner, C. Ziegenhain, W. Enard, L. Geistlinger, J. O. Rädler, A. M. Vollmar, S. Zahler

Areas: 4, 5

Magazine: Journal of Cell Science (2018), 131 (10)

Single-Cell Optical Distortion Correction and Label-Free 3D Cell Shape Reconstruction on Lattices of Nanostructures

Authors: J. Stephan, F. Keber, V. Stierle, J. O. Rädler, P. Paulitschke

Areas: 4, 5

Magazine: Nano Lett., (2017), 17 (12), pp. 8018–8023

Single-Cell Optical Distortion Correction and Label-Free 3D Cell Shape Reconstruction on Lattices of Nanostructures

Authors: J. Stephan, F. Keber, V. Stierle, J. O. Rädler, P. Paulitschke

Areas: 4, 5

Magazine: Nano Letters, (2017) 17, 12, pp. 8018–23

Parameter Estimation for Dynamical Systems with Discrete Events and Logical Operations

Authors: F. Fröhlich, F. J. Theis, J. O. Rädler, and J. Hasenauer

Areas: 4, 5

Magazine: Bioinformatics (2017), 33, no. 7, pp. 1049–1056

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